alabaster 1.0.0
This is an umbrella package for the alabaster framework that serves as an installation target to ensure that all (known) alabaster.* packages are installed. Doing so is necessary because various functions in alabaster.base dynamically identify the packages required to (un)serialize a particular resource. By installing all alabaster.* packages at once, we ensure that the dynamic look-up does not fail due to a missing package.
This umbrella is only provided for convenient installation and is not otherwise necessary for the functioning of alabaster framework. In fact, advanced users and package/application developers may prefer to install their required alabaster.* packages individually rather than relying on this umbrella. This reduces the number of dependent packages that need to be installed, which is possible in scenarios where a limited subset of resource types are to be processed.
sessionInfo()## R version 4.3.0 RC (2023-04-13 r84269)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Ubuntu 22.04.2 LTS
##
## Matrix products: default
## BLAS: /home/biocbuild/bbs-3.17-bioc/R/lib/libRblas.so
## LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.10.0
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## locale:
## [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
## [3] LC_TIME=en_GB LC_COLLATE=C
## [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
## [7] LC_PAPER=en_US.UTF-8 LC_NAME=C
## [9] LC_ADDRESS=C LC_TELEPHONE=C
## [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
##
## time zone: America/New_York
## tzcode source: system (glibc)
##
## attached base packages:
## [1] stats graphics grDevices utils datasets methods base
##
## other attached packages:
## [1] BiocStyle_2.28.0
##
## loaded via a namespace (and not attached):
## [1] digest_0.6.31 R6_2.5.1 bookdown_0.33
## [4] fastmap_1.1.1 xfun_0.39 cachem_1.0.7
## [7] knitr_1.42 htmltools_0.5.5 rmarkdown_2.21
## [10] cli_3.6.1 sass_0.4.5 jquerylib_0.1.4
## [13] compiler_4.3.0 tools_4.3.0 evaluate_0.20
## [16] bslib_0.4.2 yaml_2.3.7 BiocManager_1.30.20
## [19] jsonlite_1.8.4 rlang_1.1.0