DOI: 10.18129/B9.bioc.qsmooth  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see qsmooth.

Smooth quantile normalization

Bioconductor version: 3.17

Smooth quantile normalization is a generalization of quantile normalization, which is average of the two types of assumptions about the data generation process: quantile normalization and quantile normalization between groups.

Author: Stephanie C. Hicks [aut, cre] , Kwame Okrah [aut], Koen Van den Berge [ctb], Hector Corrada Bravo [aut] , Rafael Irizarry [aut]

Maintainer: Stephanie C. Hicks <shicks19 at jhu.edu>

Citation (from within R, enter citation("qsmooth")):


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biocViews BatchEffect, Microarray, MultipleComparison, Normalization, Preprocessing, RNASeq, Sequencing, Software
Version 1.16.0
In Bioconductor since BioC 3.9 (R-3.6) (4.5 years)
License GPL-3
Depends R (>= 4.0)
Imports SummarizedExperiment, utils, sva, stats, methods, graphics, Hmisc
Suggests bodymapRat, quantro, knitr, rmarkdown, BiocStyle, testthat
Depends On Me
Imports Me
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Source Package qsmooth_1.16.0.tar.gz
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