DOI: 10.18129/B9.bioc.pogos  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see pogos.

PharmacOGenomics Ontology Support

Bioconductor version: 3.17

Provide simple utilities for querying bhklab PharmacoDB, modeling API outputs, and integrating to cell and compound ontologies.

Author: Vince Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("pogos")):


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HTML R Script pogos -- simple interface to bhklab PharmacoDB with emphasis on ontology
PDF   Reference Manual


biocViews ImmunoOncology, Pharmacogenomics, PooledScreens, Software
Version 1.20.0
In Bioconductor since BioC 3.7 (R-3.5) (5.5 years)
License Artistic-2.0
Depends R (>= 3.5.0), rjson (>= 0.2.15), httr (>= 1.3.1)
Imports methods, S4Vectors, utils, shiny, ontoProc, ggplot2, graphics
Suggests knitr, DT, ontologyPlot, testthat, rmarkdown, BiocStyle
Depends On Me
Imports Me
Suggests Me BiocOncoTK
Links To Me
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Source Package pogos_1.20.0.tar.gz
Windows Binary pogos_1.20.0.zip
macOS Binary (x86_64) pogos_1.20.0.tgz
macOS Binary (arm64) pogos_1.20.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/pogos
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/pogos
Bioc Package Browser https://code.bioconductor.org/browse/pogos/
Package Short Url https://bioconductor.org/packages/pogos/
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