biodbNci

DOI: 10.18129/B9.bioc.biodbNci  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see biodbNci.

biodbNci, a library for connecting to biodbNci, a library for connecting to the National Cancer Institute (USA) CACTUS Database

Bioconductor version: 3.17

The biodbNci library is an extension of the biodb framework package. It provides access to biodbNci, a library for connecting to the National Cancer Institute (USA) CACTUS Database. It allows to retrieve entries by their accession number, and run specific web services.

Author: Pierrick Roger [aut, cre]

Maintainer: Pierrick Roger <pierrick.roger at cea.fr>

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("biodbNci")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("biodbNci")

 

HTML	R Script	Introduction to the biodbNci package.
PDF		Reference Manual
Text		NEWS

Details

biocViews	DataImport, Infrastructure, Software
Version	1.4.0
In Bioconductor since	BioC 3.15 (R-4.2) (1.5 years)
License	AGPL-3
Depends	R (>= 4.1)
Imports	biodb(>= 1.3.1), R6, Rcpp, chk
LinkingTo	Rcpp, testthat
Suggests	roxygen2, BiocStyle, testthat (>= 2.0.0), devtools, knitr, rmarkdown, covr, lgr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	biodbNci_1.4.0.tar.gz
Windows Binary	biodbNci_1.4.0.zip (64-bit only)
macOS Binary (x86_64)	biodbNci_1.4.0.tgz
macOS Binary (arm64)	biodbNci_1.4.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/biodbNci
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/biodbNci
Bioc Package Browser	https://code.bioconductor.org/browse/biodbNci/
Package Short Url	https://bioconductor.org/packages/biodbNci/
Package Downloads Report	Download Stats