affycomp

DOI: 10.18129/B9.bioc.affycomp  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see affycomp.

Graphics Toolbox for Assessment of Affymetrix Expression Measures

Bioconductor version: 3.17

The package contains functions that can be used to compare expression measures for Affymetrix Oligonucleotide Arrays.

Author: Rafael A. Irizarry <rafa at jhu.edu> and Zhijin Wu <zwu at stat.brown.edu> with contributions from Simon Cawley <simon_cawley at affymetrix.com>

Maintainer: Robert D. Shear <rshear at ds.dfci.harvard.edu>

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("affycomp")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("affycomp")

 

PDF	R Script	affycomp primer
PDF		Reference Manual

Details

biocViews	Microarray, OneChannel, Preprocessing, Software
Version	1.76.1
In Bioconductor since	BioC 1.6 (R-2.1) or earlier (> 18.5 years)
License	GPL (>= 2)
Depends	R (>= 2.13.0), methods, Biobase(>= 2.3.3)
Imports
LinkingTo
Suggests	splines, affycompData
SystemRequirements
Enhances
URL	https://bioconductor.org/packages/affycomp
BugReports	https://github.com/rafalab/affycomp/issues
Depends On Me	affycompData
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	affycomp_1.76.1.tar.gz
Windows Binary	affycomp_1.76.1.zip
macOS Binary (x86_64)	affycomp_1.76.1.tgz
macOS Binary (arm64)	affycomp_1.76.1.tgz
Source Repository	git clone https://git.bioconductor.org/packages/affycomp
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/affycomp
Bioc Package Browser	https://code.bioconductor.org/browse/affycomp/
Package Short Url	https://bioconductor.org/packages/affycomp/
Package Downloads Report	Download Stats