DOI: 10.18129/B9.bioc.S4Arrays  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see S4Arrays.

Foundation of array-like containers in Bioconductor

Bioconductor version: 3.17

The S4Arrays package defines the Array virtual class to be extended by other S4 classes that wish to implement a container with an array-like semantic. It also provides: (1) low-level functionality meant to help the developer of such container to implement basic operations like display, subsetting, or coercion of their array-like objects to an ordinary matrix or array, and (2) a framework that facilitates block processing of array-like objects (typically on-disk objects).

Author: Hervé Pagès [aut, cre]

Maintainer: Hervé Pagès <hpages.on.github at gmail.com>

Citation (from within R, enter citation("S4Arrays")):


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HTML R Script A quick overview of the S4Arrays package
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biocViews DataRepresentation, Infrastructure, Software
Version 1.0.6
In Bioconductor since BioC 3.17 (R-4.3) (< 6 months)
License Artistic-2.0
Depends R (>= 4.3.0), methods, Matrix, abind, BiocGenerics(>= 0.45.2), S4Vectors, IRanges
Imports stats, crayon
LinkingTo S4Vectors
Suggests BiocParallel, SparseArray(>= 0.0.4), DelayedArray, testthat, knitr, rmarkdown, BiocStyle
URL https://bioconductor.org/packages/S4Arrays
BugReports https://github.com/Bioconductor/S4Arrays/issues
Depends On Me DelayedArray, SparseArray
Imports Me HDF5Array, SummarizedExperiment
Suggests Me
Links To Me
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Source Package S4Arrays_1.0.6.tar.gz
Windows Binary S4Arrays_1.0.6.zip
macOS Binary (x86_64) S4Arrays_1.0.6.tgz
macOS Binary (arm64) S4Arrays_1.0.6.tgz
Source Repository git clone https://git.bioconductor.org/packages/S4Arrays
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/S4Arrays
Bioc Package Browser https://code.bioconductor.org/browse/S4Arrays/
Package Short Url https://bioconductor.org/packages/S4Arrays/
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