Rcollectl

DOI: 10.18129/B9.bioc.Rcollectl  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see Rcollectl.

Help use collectl with R in Linux, to measure resource consumption in R processes

Bioconductor version: 3.17

Provide functions to obtain instrumentation data on processes in a unix environment. Parse output of a collectl run. Vizualize aspects of system usage over time, with annotation.

Author: Vincent Carey [aut, cre] , Yubo Cheng [aut]

Maintainer: Vincent Carey <stvjc at channing.harvard.edu>

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Rcollectl")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rcollectl")

 

HTML	R Script	Rcollectl
PDF		Reference Manual
Text		NEWS

Details

biocViews	Infrastructure, Software
Version	1.0.1
In Bioconductor since	BioC 3.17 (R-4.3) (< 6 months)
License	Artistic-2.0
Depends
Imports	utils, ggplot2, lubridate, processx
LinkingTo
Suggests	knitr, BiocStyle, knitcitations, sessioninfo, rmarkdown, testthat, covr
SystemRequirements	collectl
Enhances
URL	https://github.com/vjcitn/Rcollectl
BugReports	https://support.bioconductor.org/t/Rcollectl
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	Rcollectl_1.0.1.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/Rcollectl
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/Rcollectl
Bioc Package Browser	https://code.bioconductor.org/browse/Rcollectl/
Package Short Url	https://bioconductor.org/packages/Rcollectl/
Package Downloads Report	Download Stats