MOSim

DOI: 10.18129/B9.bioc.MOSim  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see MOSim.

Multi-Omics Simulation (MOSim)

Bioconductor version: 3.17

MOSim package simulates multi-omic experiments that mimic regulatory mechanisms within the cell, allowing flexible experimental design including time course and multiple groups.

Author: Carlos Martínez [aut], Carolina Monzó [aut], Sonia Tarazona [cre, aut]

Maintainer: Sonia Tarazona <sotacam at gmail.com>

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MOSim")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MOSim")

 

PDF	R Script	MOSim
PDF		Reference Manual
Text		NEWS

Details

biocViews	ExperimentalDesign, RNASeq, Software, TimeCourse
Version	1.14.0
In Bioconductor since	BioC 3.10 (R-3.6) (4 years)
License	GPL-3
Depends	R (>= 4.2.0)
Imports	HiddenMarkov, zoo, methods, matrixStats, dplyr, stringi, lazyeval, rlang, stats, utils, purrr, scales, stringr, tibble, tidyr, ggplot2, Biobase, IRanges, S4Vectors
LinkingTo
Suggests	testthat, knitr, rmarkdown, BiocStyle
SystemRequirements
Enhances
URL	https://github.com/ConesaLab/MOSim
BugReports	https://github.com/ConesaLab/MOSim/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	MOSim_1.14.0.tar.gz
Windows Binary	MOSim_1.14.0.zip (64-bit only)
macOS Binary (x86_64)	MOSim_1.14.0.tgz
macOS Binary (arm64)	MOSim_1.14.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/MOSim
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/MOSim
Bioc Package Browser	https://code.bioconductor.org/browse/MOSim/
Package Short Url	https://bioconductor.org/packages/MOSim/
Package Downloads Report	Download Stats