DOI: 10.18129/B9.bioc.GeneticsPed  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see GeneticsPed.

Pedigree and genetic relationship functions

Bioconductor version: 3.17

Classes and methods for handling pedigree data. It also includes functions to calculate genetic relationship measures as relationship and inbreeding coefficients and other utilities. Note that package is not yet stable. Use it with care!

Author: Gregor Gorjanc and David A. Henderson <DNADavenator at GMail.Com>, with code contributions by Brian Kinghorn and Andrew Percy (see file COPYING)

Maintainer: David Henderson <DNADavenator at GMail.Com>

Citation (from within R, enter citation("GeneticsPed")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


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PDF R Script Calculation of genetic relatedness/relationship between individuals in the pedigree
PDF R Script Pedigree handling
PDF R Script Quantitative genetic (animal) model example in R
PDF   Reference Manual
Text   NEWS


biocViews Genetics, Software
Version 1.62.1
In Bioconductor since BioC 2.0 (R-2.5) (16.5 years)
License LGPL (>= 2.1) | file LICENSE
Depends R (>= 2.4.0), MASS
Imports gdata, genetics
Suggests RUnit, gtools
Depends On Me
Imports Me LRQMM
Suggests Me
Links To Me
Build Report  

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