DOI: 10.18129/B9.bioc.ExploreModelMatrix  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see ExploreModelMatrix.

Graphical Exploration of Design Matrices

Bioconductor version: 3.17

Given a sample data table and a design formula, ExploreModelMatrix generates an interactive application for exploration of the resulting design matrix. This can be helpful for interpreting model coefficients and constructing appropriate contrasts in (generalized) linear models. Static visualizations can also be generated.

Author: Charlotte Soneson [aut, cre] , Federico Marini [aut] , Michael Love [aut] , Florian Geier [aut] , Michael Stadler [aut]

Maintainer: Charlotte Soneson <charlottesoneson at gmail.com>

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biocViews DifferentialExpression, ExperimentalDesign, Regression, ShinyApps, Software
Version 1.12.0
In Bioconductor since BioC 3.11 (R-4.0) (3.5 years)
License MIT + file LICENSE
Imports shiny (>= 1.5.0), shinydashboard, DT, cowplot, utils, dplyr, magrittr, tidyr, ggplot2, stats, methods, rintrojs, scales, tibble, MASS, limma, S4Vectors, shinyjs
Suggests testthat (>= 2.1.0), knitr, rmarkdown, htmltools, BiocStyle
URL https://github.com/csoneson/ExploreModelMatrix
BugReports https://github.com/csoneson/ExploreModelMatrix/issues
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Source Package ExploreModelMatrix_1.12.0.tar.gz
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