DOI: 10.18129/B9.bioc.EGAD  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see EGAD.

Extending guilt by association by degree

Bioconductor version: 3.17

The package implements a series of highly efficient tools to calculate functional properties of networks based on guilt by association methods.

Author: Sara Ballouz [aut, cre], Melanie Weber [aut, ctb], Paul Pavlidis [aut], Jesse Gillis [aut, ctb]

Maintainer: Sara Ballouz <sarahballouz at>

Citation (from within R, enter citation("EGAD")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


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biocViews FunctionalGenomics, FunctionalPrediction, GenePrediction, GraphAndNetwork, Network, NetworkEnrichment, Software, SystemsBiology
Version 1.28.0
In Bioconductor since BioC 3.3 (R-3.3) (7.5 years)
License GPL-2
Depends R (>= 3.5)
Imports gplots, Biobase, GEOquery, limma, impute, RColorBrewer, zoo, igraph, plyr, MASS, RCurl, methods
Suggests knitr, testthat, rmarkdown, markdown
Depends On Me
Imports Me
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