DOI: 10.18129/B9.bioc.ASGSCA  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see ASGSCA.

Association Studies for multiple SNPs and multiple traits using Generalized Structured Equation Models

Bioconductor version: 3.17

The package provides tools to model and test the association between multiple genotypes and multiple traits, taking into account the prior biological knowledge. Genes, and clinical pathways are incorporated in the model as latent variables. The method is based on Generalized Structured Component Analysis (GSCA).

Author: Hela Romdhani, Stepan Grinek , Heungsun Hwang and Aurelie Labbe.

Maintainer: Hela Romdhani <hela.romdhani at>

Citation (from within R, enter citation("ASGSCA")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script Association Studies using Generalized Structured Equation Models.
PDF   Reference Manual
Text   NEWS


biocViews Software, StructuralEquationModels
Version 1.34.0
In Bioconductor since BioC 3.0 (R-3.1) (9 years)
License GPL-3
Imports Matrix, MASS
Suggests BiocStyle
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ASGSCA_1.34.0.tar.gz
Windows Binary
macOS Binary (x86_64) ASGSCA_1.34.0.tgz
macOS Binary (arm64) ASGSCA_1.34.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
Bioc Package Browser
Package Short Url
Package Downloads Report Download Stats

Documentation »


R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: