AGDEX

DOI: 10.18129/B9.bioc.AGDEX  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see AGDEX.

Agreement of Differential Expression Analysis

Bioconductor version: 3.17

A tool to evaluate agreement of differential expression for cross-species genomics

Author: Stan Pounds <stanley.pounds at stjude.org>; Cuilan Lani Gao <cuilan.gao at stjude.org>

Maintainer: Cuilan lani Gao <cuilan.gao at stjude.org>

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("AGDEX")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AGDEX")

 

PDF	R Script	AGDEX.pdf
PDF		Reference Manual

Details

biocViews	GeneExpression, Genetics, Microarray, Software
Version	1.48.0
In Bioconductor since	BioC 2.9 (R-2.14) (12 years)
License	GPL Version 2 or later
Depends	R (>= 2.10), Biobase, GSEABase
Imports	stats
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Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	AGDEX_1.48.0.tar.gz
Windows Binary	AGDEX_1.48.0.zip
macOS Binary (x86_64)	AGDEX_1.48.0.tgz
macOS Binary (arm64)	AGDEX_1.48.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/AGDEX
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/AGDEX
Bioc Package Browser	https://code.bioconductor.org/browse/AGDEX/
Package Short Url	https://bioconductor.org/packages/AGDEX/
Package Downloads Report	Download Stats