Counting Reads in High-Throughput Sequencing Screens
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Documentation for package ‘screenCounter’ version 1.0.1
Help Pages
| screenCounter-package | The screenCounter package |
| combineComboCounts | Combine combinatorial barcode counts |
| countComboBarcodes | Count combinatorial barcodes |
| countDualBarcodes | Count dual barcodes |
| countPairedComboBarcodes | Count paired-end combinatorial barcodes |
| countRandomBarcodes | Count random barcodes |
| countSingleBarcodes | Count single barcodes |
| matrixOfComboBarcodes | Count combinatorial barcodes |
| matrixOfDualBarcodes | Count dual barcodes |
| matrixOfPairedComboBarcodes | Count paired-end combinatorial barcodes |
| matrixOfRandomBarcodes | Count random barcodes |
| matrixOfSingleBarcodes | Count single barcodes |
| parseBarcodeTemplate | Parse barcode template |