Inference of Genetic Variants Driving Cellular Phenotypes

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Documentation for package ‘diggit’ version 1.32.0

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• User guides, package vignettes and other documentation.
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aecdf	Approximate empirical commulative distribution function
aqtl	Inference of aQTL
aqtl-method	Inference of aQTL
conditional	Conditional analysis of CNVs
conditional-method	Conditional analysis of CNVs
correlation	Correlation test
diggit-class	The diggit class
diggitAqtl	Basic methods for class diggit
diggitAqtl-method	Basic methods for class diggit
diggitClass	The diggit class
diggitCNV	Basic methods for class diggit
diggitCNV-method	Basic methods for class diggit
diggitConditional	Basic methods for class diggit
diggitConditional-method	Basic methods for class diggit
diggitFcnv	Basic methods for class diggit
diggitFcnv-method	Basic methods for class diggit
diggitMindy	Basic methods for class diggit
diggitMindy-method	Basic methods for class diggit
diggitMR	Basic methods for class diggit
diggitMR-method	Basic methods for class diggit
diggitRegulon	Basic methods for class diggit
diggitRegulon-method	Basic methods for class diggit
diggitViper	Basic methods for class diggit
diggitViper-method	Basic methods for class diggit
exprs-method	Basic methods for class diggit
exprs.diggit	Basic methods for class diggit
fCNV	Inference of functional CNVs
fCNV-method	Inference of functional CNVs
head-method	Basic methods for class diggit
head.diggit	Basic methods for class diggit
marina	Inference of Master Regulators
marina-method	Inference of Master Regulators
mindyFiltering	Basic methods for class diggit
mindyFiltering-method	Basic methods for class diggit
mutualInfo	Mutual information
plot	Diggit plot
plot-method	Diggit plot
print-method	Basic methods for class diggit
print.diggit	Basic methods for class diggit
show-method	Basic methods for class diggit
show.diggit	Basic methods for class diggit
summary-method	Basic methods for class diggit
summary.diggit	Basic methods for class diggit