Performs Bayesian GWAS analysis for non-Gaussian data using BG2


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Documentation for package ‘BG2’ version 1.0.0

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BG2 Performs BG2 as described in the manuscript, Xu, Williams, and Ferreira BG2: Bayesian variable selection in generalized linear mixed models with non-local priors for non-Gaussian GWAS data, Bioinformatics, Submitted.
kinship A. Thaliana Kinship matrix
SNPs A. Thaliana Genotype matrix
Y_binary A. Thaliana Simulated Phenotype matrix
Y_poisson A. Thaliana Simulated Phenotype matrix