Functions for the projection of weights from PCA, CoGAPS, NMF, correlation, and clustering

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Documentation for package ‘projectR’ version 1.16.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

alluvialMat	alluvialMat
AP.RNAseq6l3c3t	CoGAPS patterns and genes weights for p.RNAseq6l3c3t
aucMat	aucMat
cluster2pattern	Generic cluster2pattern function
cluster2pattern-method	Generic cluster2pattern function
clusterPlotR	Generic clusterPlotR function
clusterPlotR-method	Generic clusterPlotR function
correlateR	correlateR
correlateR-class	correlateR
geneMatchR	Generic geneMatchR function
initialize-method	Constructor for correlateR
initialize-method	Constructor for rotatoR
intersectoR	Generic intersectoR function
intersectoR-method	Generic intersectoR function
map.ESepiGen4c1l	RNAseqing and ChIPSeq of matched genes in differentiated human iPS cells
map.RNAseq6l3c3t	RNAseqing from human 3 iPS & 3 ES cell lines in 3 experimental condition at 3 time points
p.ESepiGen4c1l	RNAseqing and ChIPSeq of matched genes in differentiated human iPS cells
p.RNAseq6l3c3t	RNAseqing from human 3 iPS & 3 ES cell lines in 3 experimental condition at 3 time points
pd.ESepiGen4c1l	RNAseqing and ChIPSeq of matched genes in differentiated human iPS cells
pd.RNAseq6l3c3t	RNAseqing from human 3 iPS & 3 ES cell lines in 3 experimental condition at 3 time points
projectR	Generic projectR function
projectR-method	Generic projectR function
rotatoR	rotatoR
rotatoR-class	rotatoR