Integrative Statistics of alleLe Dependent Expression

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Documentation for package ‘ISoLDE’ version 1.28.0

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ISoLDE-package INTEGRATIVE STATISTICS OF ALLELE DEPENDENT EXPRESSION
filteredASRcounts NORMALIZED AND FILTERED ALLELE SPECIFIC READ (ASR) COUNTS FOR AN EXPERIENCE WITH MORE THAN TWO REPLICATES
filteredASRcounts.rda NORMALIZED AND FILTERED ALLELE SPECIFIC READ (ASR) COUNTS FOR AN EXPERIENCE WITH MORE THAN TWO REPLICATES
filterT FILTERING GENES BEFORE STATISTICAL ANALYSIS
ISoLDE INTEGRATIVE STATISTICS OF ALLELE DEPENDENT EXPRESSION
isolde_test Statistical analysis of Allele specific read (ASR) counts
normASRcounts NORMALIZED ALLELE SPECIFIC READ (ASR) COUNTS FOR AN EXPERIENCE WITH MORE THAN TWO REPLICATES
normASRcounts_file NORMALIZED ALLELE SPECIFIC READ (ASR) COUNTS FOR AN EXPERIENCE WITH MORE THAN TWO REPLICATES
normASRcounts_file.txt NORMALIZED ALLELE SPECIFIC READ (ASR) COUNTS FOR AN EXPERIENCE WITH MORE THAN TWO REPLICATES
rawASRcounts RAW ALLELE SPECIFIC READ (ASR) COUNTS FOR AN EXPERIENCE WITH MORE THAN TWO REPLICATES
rawASRcounts_file RAW ALLELE SPECIFIC READ (ASR) COUNTS FOR AN EXPERIENCE WITH MORE THAN TWO REPLICATES
rawASRcounts_file.txt RAW ALLELE SPECIFIC READ (ASR) COUNTS FOR AN EXPERIENCE WITH MORE THAN TWO REPLICATES
readNormInput READ THE NORMALIZED DATA FILE
readRawInput READ THE RAW DATA FILE
readTarget READ THE TARGET FILE
target METADATA ABOUT THE ASR COUNT DATA.
target_file METADATA ABOUT THE ASR COUNT DATA.
target_file.txt METADATA ABOUT THE ASR COUNT DATA.