R functions for the normalization of Exiqon miRNA array data

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Documentation for package ‘ExiMiR’ version 2.42.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

bg.correct.miR	ExiMiR low-level function for background correction
createAB	ExiMiR function for creating an AffyBatch object from other object types (RGList, EListRaw, MAList or list)
ExiMiR	R functions for the normalization of Exiqon miRNA array data
galenv	R annotation environment for GEO series GSE20122
GSE19183	Affybatch object for the raw data from GEO series GSE19183
GSE20122	Affybatch object for the raw data from GEO series GSE20122
make.gal.env	GAL Environment Maker
norm.miR	ExiMiR low-level function for miRNA raw data normalization.
NormiR	ExiMiR high-level function for miRNA raw data normalization.
NormiR.bgcorrect.methods	ExiMiR functions for enumerating the names of low-level normalization methods or arguments
NormiR.normalize.methods	ExiMiR functions for enumerating the names of low-level normalization methods or arguments
NormiR.pmcorrect.methods	ExiMiR functions for enumerating the names of low-level normalization methods or arguments
NormiR.spikein.args	ExiMiR functions for enumerating the names of low-level normalization methods or arguments
NormiR.summary.methods	ExiMiR functions for enumerating the names of low-level normalization methods or arguments
ReadExi	ExiMiR function for reading Exiqon raw data into an AffyBatch object.
summarize.miR	ExiMiR low-level function for summarization.