AMARETTO_CreateModuleData | AMARETTO_CreateModuleData |
AMARETTO_CreateRegulatorPrograms | AMARETTO_CreateRegulatorPrograms |
AMARETTO_Download | AMARETTO_Download |
AMARETTO_EvaluateTestSet | AMARETTO_EvaluateTestSet |
AMARETTO_ExportResults | AMARETTO_ExportResults |
AMARETTO_HTMLreport | AMARETTO_HTMLreport |
AMARETTO_Initialize | AMARETTO_Initialize (version: reorder and filter MA_Matrix) |
AMARETTO_Preprocess | AMARETTO_Preprocess |
AMARETTO_Run | AMARETTO_Run Function to run AMARETTO, a statistical algorithm to identify cancer drivers by integrating a variety of omics data from cancer and normal tissue. |
AMARETTO_VisualizeModule | AMARETTO_VisualizeModule |
BatchData | BatchData |
Driver_Genes | Driver_Genes |
MsigdbMapping | MsigdbMapping |
plot_run_history | Title plot_run_history |
ProcessedDataLIHC | ProcessedDataLIHC |
read_gct | read_gct |