sampleClassifierData

DOI: 10.18129/B9.bioc.sampleClassifierData  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see sampleClassifierData.

Pre-processed data for use with the sampleClassifier package

Bioconductor version: 3.16

This package contains two microarray and two RNA-seq datasets that have been preprocessed for use with the sampleClassifier package. The RNA-seq data are derived from Fagerberg et al. (2014) and the Illumina Body Map 2.0 data. The microarray data are derived from Roth et al. (2006) and Ge et al. (2005).

Author: Khadija El Amrani

Maintainer: Khadija El Amrani <khadija.el-amrani at charite.de>

Citation (from within R, enter citation("sampleClassifierData")):

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("sampleClassifierData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("sampleClassifierData")

 

PDF R Script sampleClassifierData Introduction
PDF   Reference Manual
Text   NEWS

Details

biocViews ArrayExpress, ExperimentData, ExpressionData, MicroarrayData, RNASeqData, SequencingData
Version 1.22.0
License Artistic-2.0
Depends R (>= 3.5.0), SummarizedExperiment
Imports
LinkingTo
Suggests BiocStyle
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me sampleClassifier
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package sampleClassifierData_1.22.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/sampleClassifierData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/sampleClassifierData
Package Short Url https://bioconductor.org/packages/sampleClassifierData/
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