SingleMoleculeFootprintingData

DOI: 10.18129/B9.bioc.SingleMoleculeFootprintingData  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see SingleMoleculeFootprintingData.

Data supporting the SingleMoleculeFootprinting pkg

Bioconductor version: 3.16

This Data package contains data objcets relevanat for the SingleMoleculeFootprinting package. More specifically, it contains one example of aligned sequencing data (.bam & .bai) necessary to run the SingleMoleculeFootprinting vignette. Additionally, we provide data that are essential for some functions to work correctly such as BaitCapture() and SampleCorrelation().

Author: Guido Barzaghi [aut, cre] , Arnaud Krebs [aut] , Mike Smith [ctb]

Maintainer: Guido Barzaghi <guido.barzaghi at embl.de>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("SingleMoleculeFootprintingData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SingleMoleculeFootprintingData")

 

HTML	R Script	SingleMoleculeFootprintingData
PDF		Reference Manual
Text		LICENSE

Details

biocViews	ExperimentData, ExperimentHub, SequencingData
Version	1.6.0
License	GPL-3
Depends
Imports	ExperimentHub, utils
LinkingTo
Suggests	knitr, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	SingleMoleculeFootprinting
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	SingleMoleculeFootprintingData_1.6.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/SingleMoleculeFootprintingData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/SingleMoleculeFootprintingData
Package Short Url	https://bioconductor.org/packages/SingleMoleculeFootprintingData/
Package Downloads Report	Download Stats