EpiMix.data

DOI: 10.18129/B9.bioc.EpiMix.data    

This is the development version of EpiMix.data; to use it, please install the devel version of Bioconductor.

Data for the EpiMix package

Bioconductor version: Development (3.16)

Supporting data for the EpiMix R package. It include: - HM450_lncRNA_probes.rda - HM450_miRNA_probes.rda - EPIC_lncRNA_probes.rda - EPIC_miRNA_probes.rda - EpigenomeMap.rda - LUAD.sample.annotation - TCGA_BatchData - MET.data - mRNA.data - microRNA.data - lncRNA.data - Sample_EpiMixResults_lncRNA - Sample_EpiMixResults_miRNA - Sample_EpiMixResults_Regular - lncRNA expression data of tumors from TCGA that are stored in the ExperimentHub.

Author: Yuanning Zheng [aut, cre]

Maintainer: Yuanning Zheng <eric2021 at stanford.edu>

Citation (from within R, enter citation("EpiMix.data")):

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("EpiMix.data")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("EpiMix.data")

 

HTML R Script vignette
PDF   Reference Manual
Text   NEWS

Details

biocViews ExperimentData, ExperimentHub, ExpressionData, Genome, RNASeqData
Version 0.99.3
License GPL-3
Depends R (>= 4.2.0), ExperimentHub(>= 0.99.6)
Imports
LinkingTo
Suggests rmarkdown, knitr
SystemRequirements
Enhances
URL
BugReports https://github.com/gevaertlab/EpiMix/issues
Depends On Me EpiMix
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package EpiMix.data_0.99.3.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository git clone https://git.bioconductor.org/packages/EpiMix.data
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/EpiMix.data
Package Short Url https://bioconductor.org/packages/EpiMix.data/
Package Downloads Report Download Stats

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