UCSCRepeatMasker

DOI: 10.18129/B9.bioc.UCSCRepeatMasker  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see UCSCRepeatMasker.

UCSC RepeatMasker AnnotationHub resource metadata

Bioconductor version: 3.16

Store UCSC RepeatMasker AnnotationHub resource metadata. Provide provenance and citation information for UCSC RepeatMasker AnnotationHub resources. Illustrate in a vignette how to access those resources.

Author: Robert Castelo [aut, cre], Beatriz Calvo [ctb]

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("UCSCRepeatMasker")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("UCSCRepeatMasker")

 

HTML	R Script	UCSC RepeatMasker AnnotationHub Resource Metadata
PDF		Reference Manual
Text		NEWS

Details

biocViews	AnnotationData, AnnotationHub
Version	3.15.2
License	Artistic-2.0
Depends	AnnotationHub, GenomeInfoDb
Imports	XML, RCurl
LinkingTo
Suggests	knitr, rmarkdown, BiocStyle
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	UCSCRepeatMasker_3.15.2.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url	https://bioconductor.org/packages/UCSCRepeatMasker/
Package Downloads Report	Download Stats