JASPAR2020

DOI: 10.18129/B9.bioc.JASPAR2020  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see JASPAR2020.

Data package for JASPAR database (version 2020)

Bioconductor version: 3.16

Data package for JASPAR2020. To search this databases, please use the package TFBSTools (>= 1.23.1).

Author: Damir Baranasic <damir.baranasic at lms.mrc.ac.uk>

Maintainer: Damir Baranasic <damir.baranasic at lms.mrc.ac.uk>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("JASPAR2020")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("JASPAR2020")

 

HTML	R Script	JASPAR2020
PDF		Reference Manual

Details

biocViews	AnnotationData, FunctionalAnnotation
Version	0.99.10
License	GPL-2
Depends	R (>= 3.6.0), methods
Imports
LinkingTo
Suggests	knitr, rmarkdown, TFBSTools(>= 1.23.1)
SystemRequirements
Enhances
URL	http://jaspar.genereg.net/
Depends On Me
Imports Me
Suggests Me	monaLisa, motifStack
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	JASPAR2020_0.99.10.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url	https://bioconductor.org/packages/JASPAR2020/
Package Downloads Report	Download Stats