# Version 1.1.11 Documentation update # Version 1.1.10 Changed vignette to use quicker examples Changed DESCRIPTION # Version 1.1.9 Documentation update # Version 1.1.8 Removed PC dependent tests for paxtools functions Added skip_on_bioc() Updated vignette to use glycolysis pathway that can be converted to gene set Added fill=TRUE to read.table commands in paxtools.R # Version 1.1.6 Added RStudio files and README.md # Version 1.1.5 Updated to paxtools 4.3 Added better Java error messages Added the ability to switch PC versions Updated to PC version 6 # Version 1.1.4 Fixed topPathways() bug Fixed fetch() example/test Changed title # Version 1.1.3 Added CITATION file # Version 1.1.2 Update vignette to use BiocStyle # Version 1.1.1 Transitioned to Pathway Commons Version 5 (PC2 v5) Changed downloadPc to download from PC2 v5 Changed code to validate Pathway Commons webservice requests Added table of contents to vignette Added description for traverse() in vignette Changed R dependency to 3.1.1 to match Bioconductor 3 Added function to download a single file extended SIF, splitSifnx Added the ability to download GMT in downloadPc Added function to read GMT files Added tests for new functions # Version 1.0.0 Initial release