tscR

DOI: 10.18129/B9.bioc.tscR  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see tscR.

A time series clustering package combining slope and Frechet distances

Bioconductor version: 3.16

Clustering for time series data using slope distance and/or shape distance.

Author: Fernando Pérez-Sanz [aut, cre], Miriam Riquelme-Pérez [aut]

Maintainer: Fernando Pérez-Sanz <fernando.perez8 at um.es>

Citation (from within R, enter citation("tscR")):

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("tscR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("tscR")

 

HTML R Script tscR
PDF   Reference Manual
Text   NEWS

Details

biocViews Clustering, DNAMethylation, GeneExpression, Microarray, Software
Version 1.10.0
In Bioconductor since BioC 3.11 (R-4.0) (3 years)
License Artistic-2.0
Depends R (>= 4.1.0), dplyr
Imports gridExtra, methods, dtw, class, kmlShape, graphics, cluster, RColorBrewer, grDevices, knitr, rmarkdown, prettydoc, grid, ggplot2, latex2exp, stats, SummarizedExperiment, GenomicRanges, IRanges, S4Vectors
LinkingTo
Suggests testthat
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
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Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package tscR_1.10.0.tar.gz
Windows Binary tscR_1.10.0.zip
macOS Binary (x86_64) tscR_1.10.0.tgz
macOS Binary (arm64) tscR_1.10.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/tscR
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/tscR
Bioc Package Browser https://code.bioconductor.org/browse/tscR/
Package Short Url https://bioconductor.org/packages/tscR/
Package Downloads Report Download Stats

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