lpsymphony

DOI: 10.18129/B9.bioc.lpsymphony  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see lpsymphony.

Symphony integer linear programming solver in R

Bioconductor version: 3.16

This package was derived from Rsymphony_0.1-17 from CRAN. These packages provide an R interface to SYMPHONY, an open-source linear programming solver written in C++. The main difference between this package and Rsymphony is that it includes the solver source code (SYMPHONY version 5.6), while Rsymphony expects to find header and library files on the users' system. Thus the intention of lpsymphony is to provide an easy to install interface to SYMPHONY. For Windows, precompiled DLLs are included in this package.

Author: Vladislav Kim [aut, cre], Ted Ralphs [ctb], Menal Guzelsoy [ctb], Ashutosh Mahajan [ctb], Reinhard Harter [ctb], Kurt Hornik [ctb], Cyrille Szymanski [ctb], Stefan Theussl [ctb]

Maintainer: Vladislav Kim <Vladislav.Kim at embl.de>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("lpsymphony")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("lpsymphony")

 

PDF	R Script	Introduction to lpsymphony
PDF		Reference Manual

Details

biocViews	Infrastructure, Software, ThirdPartyClient
Version	1.26.3
In Bioconductor since	BioC 3.3 (R-3.3) (7 years)
License	EPL
Depends	R (>= 3.0.0)
Imports
LinkingTo
Suggests	BiocStyle, knitr, testthat
SystemRequirements	GNU make
Enhances	slam
URL	http://R-Forge.R-project.org/projects/rsymphony https://projects.coin-or.org/SYMPHONY http://www.coin-or.org/download/source/SYMPHONY/
Depends On Me
Imports Me	IHW, Maaslin2
Suggests Me	oppr, prioritizr
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	lpsymphony_1.26.3.tar.gz
Windows Binary	lpsymphony_1.26.3.zip
macOS Binary (x86_64)	lpsymphony_1.26.3.tgz
macOS Binary (arm64)	lpsymphony_1.26.3.tgz
Source Repository	git clone https://git.bioconductor.org/packages/lpsymphony
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/lpsymphony
Bioc Package Browser	https://code.bioconductor.org/browse/lpsymphony/
Package Short Url	https://bioconductor.org/packages/lpsymphony/
Package Downloads Report	Download Stats