aggregateFeaturesOverAssays | Aggregate features over multiple assays |
computeSCR | Compute the sample over carrier ratio (SCR) |
divideByReference | Divide assay columns by a reference column |
medianCVperCell | Compute the median coefficient of variation (CV) per cell |
mqScpData | Example MaxQuant/SCoPE2 output |
normalizeSCP | Normalize single-cell proteomics (SCP) data |
pep2qvalue | Compute q-values |
readSCP | Read single-cell proteomics data as a QFeatures object from tabular data and metadata |
readSingleCellExperiment | Read SingleCellExperiment from tabular data |
sampleAnnotation | Single cell sample annotation |
scp1 | Single Cell QFeatures data |