convertToSE | SummarizedExperiment('SE') or 'TreeSE' construction function |
powerlawA | Interaction matrix with Power-Law network adjacency matrix |
randomA | Generate random uniform interaction matrix |
randomE | Generate random efficiency matrix |
simulateConsumerResource | Consumer-resource model simulation |
simulateGLV | Generalized Lotka-Volterra (gLV) simulation |
simulateHubbell | Hubbell's neutral model simulation |
simulateHubbellRates | Hubbell's neutral model simulation applied to time series |
simulateRicker | Generate time series with the Ricker model |
simulateSOI | Self-Organised Instability model (SOI) simulation |
simulateStochasticLogistic | Stochastic Logistic simulation |