Customize and Query Compound Annotation Database


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Documentation for package ‘customCMPdb’ version 1.8.0

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customCMPdb-package Customize and Query Compound Annotation Database
addCustomAnnot Add/Delete Custom Annotation
buildCMAPdb Build CMAP Database
buildDrugAgeDB Build DrugAge Annotation Database
customAnnot Add/Delete Custom Annotation
customCMPdb Customize and Query Compound Annotation Database
dbxml2df Convert drugbank database (xml file) into dataframe.
defaultAnnot Add/Delete Custom Annotation
deleteAnnot Add/Delete Custom Annotation
df2SQLite Store drugbank dataframe into an SQLite database
listAnnot Add/Delete Custom Annotation
loadAnnot Load Compound Annotation Database
loadSDFwithName Load Compound Structures from Four Resources
processDrugage Process Source DrugAge Dataset
queryAnnotDB Annotation Queries with Compound IDs