Longitudinal system suitability monitoring and quality control for proteomic experiments


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Documentation for package ‘MSstatsQC’ version 2.16.0

Help Pages

ChangePointEstimator A function to identify the time of a change in the mean or variability of a metric
CUSUMChart A function to create cumulative sum charts for mean (CUSUMm) and cumulative sum charts for variability (CUSUMv) control charts
DataProcess A data processing function
DecisionMap A function to create heatmaps to compare performance with user defined performance criteria
MissingDataMap A function to summarize missing values
MSnbaseToMSstatsQC A function to convert MSnbase files to MSstatsQC format
QCloudDDA DDA QC data from QCloud System
QCloudSRM SRM QC data from QCloud System
QuiCDIA DIA iRT data from QuiC System
RadarPlot A function to create radar plot to aggregate results from X and mR charts or CUSUMm and CUSUMv charts.
RemoveMissing A data processing function for removing missing values
RiverPlot A function to create river plot to aggregate results from X and mR charts or CUSUMm and CUSUMv charts.
S9Site54 CPTAC study 9.1 site 54 dataset
XmRChart A function to construct individual (X) and moving range (mR) control charts