Gene Set Analysis in R


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Documentation for package ‘GSAR’ version 1.32.1

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GSAR-package Gene Set Analysis in R
AggrFtest Aggregated F-Test of Variance Using Fisher's Probability Combining Method
findMST2 Union of the First and Second Minimum Spanning Trees
findMST2.PPI Union of the First and Second Minimum Spanning Trees for PPI Networks
GSAR Gene Set Analysis in R
GSNCAtest Gene Sets Net Correlations Analysis
HDP.ranking High Directed Preorder Ranking of MST
KStest Multivariate Kolmogorov-Smirnov Test of Means
MDtest Multivariate Mean Deviation Test of Means
p53DataSet p53 Dataset of the NCI-60 Cell Lines
plotMST2.pathway Plot MST2 for a pathway in two conditions
radial.ranking Radial Ranking of MST
RKStest Multivariate Radial Kolmogorov-Smirnov Test of Variance
RMDtest Multivariate Radial Mean Deviation Test of Variance
TestGeneSets Test a List of Gene Sets Using a Specific Statistical Method
WWtest Multivariate Generalization of the Wald-Wolfowitz Runs Test