GeneSummary

DOI: 10.18129/B9.bioc.GeneSummary    

This package is for version 3.15 of Bioconductor; for the stable, up-to-date release version, see GeneSummary.

RefSeq Gene Summaries

Bioconductor version: 3.15

This package provides long description of genes collected from the RefSeq database. The text in "COMMENT" section started with "Summary" is extracted as the description of the gene. The long text descriptions can be used for analysis such as text mining.

Author: Zuguang Gu [aut, cre]

Maintainer: Zuguang Gu <z.gu at dkfz.de>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GeneSummary")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GeneSummary")

 

HTML	R Script	Gene Summaries from RefSeq Database
PDF		Reference Manual
Text		NEWS
Text		LICENSE

Details

biocViews	AnnotationData, Homo_sapiens, Organism
Version	0.99.3
License	MIT + file LICENSE
Depends	R (>= 4.1)
Imports
LinkingTo
Suggests	knitr, rmarkdown, markdown, testthat
SystemRequirements
Enhances
URL	https://github.com/jokergoo/GeneSummary
BugReports	https://github.com/jokergoo/GeneSummary/issues
Depends On Me
Imports Me
Suggests Me
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	GeneSummary_0.99.3.tar.gz
Windows Binary
macOS Binary (x86_64)
Package Short Url	https://bioconductor.org/packages/GeneSummary/
Package Downloads Report	Download Stats