VERSION 0.99.12 (08-25-2020) ___________________________ Changes: * re-generate NAMESPACE via Roxygen * clarify man pages * incorporate runnable examples in man pages and vignette * add catches to functions if software is unavailable VERSION 0.99.13 (02-25-2021) ____________________________ Changes: * edit bindingContextDistanceCapR to properly accommodate range limitations in calculations * edit bindingContextDistance to properly accommodate range limitations in calculations * add symmetryCapR and symmetryContext functions to determine binding context symmetry about the site of protein binding * edit visualizeStereogene and visualizeCapRStereogene so that the x axis says 'Nucleotide' rather than 'Distance' and so that the user may manipulate the number of standard deviations are illustrated by the error bars VERSION 1.1.4 (03-23-2021) ____________________________ Changes: * remove variable assignment bugs from symmetryContext VERSION 1.3.1 (06-01-2021) ____________________________ Changes: * include ability to iteratively acquire and visualize Bkg std error * new arguments to choose whether to calculate Bkg std error * accomodate StereoGene version 2.22, esp. seeding of analysis * better run analysis on track files outside local directory VERSION 1.3.3 (07-30-2021) ____________________________ Changes: * update description to accommodate changes in knitr/rmarkdown packages * update dummy data files to new format so vignette can run