scatterHatch

DOI: 10.18129/B9.bioc.scatterHatch    

This package is for version 3.15 of Bioconductor; for the stable, up-to-date release version, see scatterHatch.

Creates hatched patterns for scatterplots

Bioconductor version: 3.15

The objective of this package is to efficiently create scatterplots where groups can be distinguished by color and texture. Visualizations in computational biology tend to have many groups making it difficult to distinguish between groups solely on color. Thus, this package is useful for increasing the accessibility of scatterplot visualizations to those with visual impairments such as color blindness.

Author: Atul Deshpande [aut, cre]

Maintainer: Atul Deshpande <adeshpande at jhu.edu>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("scatterHatch")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("scatterHatch")

 

HTML	R Script	Creating a Scatterplot with Texture
PDF		Reference Manual
Text		NEWS
Text		LICENSE

Details

biocViews	CellBiology, SingleCell, Software, Spatial, Visualization
Version	1.2.0
In Bioconductor since	BioC 3.14 (R-4.1) (1 year)
License	MIT + file LICENSE
Depends	R (>= 4.1)
Imports	grid, ggplot2, plyr, spatstat.geom, stats, grDevices
LinkingTo
Suggests	knitr, rmarkdown, testthat
SystemRequirements
Enhances
URL	https://github.com/FertigLab/scatterHatch
BugReports	https://github.com/FertigLab/scatterHatch/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	scatterHatch_1.2.0.tar.gz
Windows Binary	scatterHatch_1.2.0.zip
macOS Binary (x86_64)	scatterHatch_1.2.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/scatterHatch
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/scatterHatch
Package Short Url	https://bioconductor.org/packages/scatterHatch/
Package Downloads Report	Download Stats