Microbiome Differential Abundance Simulation


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Documentation for package ‘microbiomeDASim’ version 1.10.0

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form_beta_check Beta Specification Check
gen_norm_microbiome Generate Longitduinal Differential Abundance from Multivariate Normal
gen_norm_microbiome_obs Generate Longitduinal Differential Abundance from Multivariate Normal with Observed Data
ggplot_spaghetti Spaghetti Plots using 'ggplot2'
mean_trend Function for Generating Various Longitudinal Mean Trends
mvrnorm_corr_gen Generate Multivariate Random Normal Longitudinal Data
mvrnorm_sim Simulate Microbiome Longitudinal Data from Multivariate Random Normal
mvrnorm_sim_obs Simulate Microbiome Longitudinal Data from Multivariate Random Normal with Observed Data
simulate2MRexperiment Convert simulated output to MRexperiment object
simulate2phyloseq Convert simulated output to phyloseq object