Retrieves Condition-Specific Variants in RNA-Seq Data


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Documentation for package ‘kissDE’ version 1.16.0

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kissDE-package Retrieves condition-specific variants in RNA-seq data
diffExpressedVariants Retrieve condition-specific variants in RNA-seq data
exploreResults Print kissDE results in an interactive Shiny application
kissDE Run the whole kissDE analysis
kissplice2counts Conversion of 'KisSplice' or 'KisSplice2RefGenome' outputs
qualityControl Quality control plots
writeOutputKissDE Create and store the output of the 'diffExpressedVariants' function in a file and in a rds object.