DOI: 10.18129/B9.bioc.basilisk    

This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see basilisk.

Freezing Python Dependencies Inside Bioconductor Packages

Bioconductor version: 3.14

Installs a self-contained conda instance that is managed by the R/Bioconductor installation machinery. This aims to provide a consistent Python environment that can be used reliably by Bioconductor packages. Functions are also provided to enable smooth interoperability of multiple Python environments in a single R session.

Author: Aaron Lun [aut, cre, cph], Vince Carey [ctb]

Maintainer: Aaron Lun <infinite.monkeys.with.keyboards at>

Citation (from within R, enter citation("basilisk")):


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biocViews Infrastructure, Software
Version 1.6.0
In Bioconductor since BioC 3.11 (R-4.0) (2 years)
License GPL-3
Imports utils, methods, parallel, reticulate, dir.expiry, basilisk.utils
Suggests knitr, rmarkdown, BiocStyle, testthat, callr
Depends On Me
Imports Me BiocSklearn, cbpManager, dasper, densvis, FLAMES, MACSr, MOFA2, Rcwl, snifter, spatialDE, velociraptor, zellkonverter
Suggests Me
Links To Me
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Source Package basilisk_1.6.0.tar.gz
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