getSolverNames,EnsembleSolver-method {trena} | R Documentation |
Retrieve the solver names from an EnsembleSolver object
## S4 method for signature 'EnsembleSolver' getSolverNames(obj)
obj |
An object of class Solver |
The vector of solver names associated with an EnsembleSolver object
# Create a Solver object using the included Alzheimer's data and retrieve the regulators load(system.file(package="trena", "extdata/ampAD.154genes.mef2cTFs.278samples.RData")) targetGene <- "MEF2C" candidateRegulators <- setdiff(rownames(mtx.sub), targetGene) solver <- EnsembleSolver(mtx.sub, targetGene, candidateRegulators, solverNames = c("lasso","randomForest")) solver.names <- getSolverNames(solver)