expandMs1Conditions {topdownr} | R Documentation |
Create a data.frame
of all possible combinations of the given arguments.
It ensures that just arguments are applied that yield a valid
MethodModification.xml file.
expandMs1Conditions(..., family = "Calcium", version = "3.2") expandTms2Conditions( ActivationType = c("CID", "HCD", "ETD", "UVPD"), ..., MassList = NULL, family = "Calcium", version = "3.2" )
... |
further named arguments, used to create the combination of conditions. |
family |
|
version |
|
ActivationType |
|
MassList |
|
data.frame
with all possible combinations of conditions/settings.
validTms2Settings()
, expand.grid()
expandMs1Conditions(FirstMass=100, LastMass=400) expandTms2Conditions( ActivationType="CID", OrbitrapResolution="R120K", IsolationWindow=1, MaxITTimeInMS=200, Microscans=as.integer(40), AgcTarget=c(1e5, 5e5, 1e6), CIDCollisionEnergy=c(NA, seq(7, 35, 7)), MassList=cbind(mz=c(560.6, 700.5, 933.7), z=rep(1, 3)) )