mv_sample_filter {structToolbox} | R Documentation |
Filters samples by removing those where the percent number of missing values exceeds a predefined threshold.
mv_sample_filter(mv_threshold = 20, ...)
mv_threshold |
(numeric) The theshold for excluding samples. The default is |
... |
Additional slots and values passed to |
This object makes use of functionality from the following packages:
pmp
A mv_sample_filter
object with the following output
slots:
filtered | (DatasetExperiment) A DatasetExperiment object containing the filtered data. |
flags | (data.frame) A flag indicating whether the sample was rejected. 0 = rejected. |
percent_missing | (data.frame) |
Jankevics A, Lloyd GR, Weber RJM (2021). pmp: Peak Matrix Processing and signal batch correction for metabolomics datasets. R package version 1.5.0.
C = mv_sample_filter()