deg.table {spatialHeatmap}R Documentation

A table of differentialy-expressed genes (DEGs) detected by different methods

Description

A table of up- and down-DEGs detected by different methods such as edgeR, limma, DEseq2.

Usage

data(deg.table)

Format

A table.

Source

ExpressionAtlas E-MTAB-6769

References

Cardoso-Moreira, Margarida, Jean Halbert, Delphine Valloton, Britta Velten, Chunyan Chen, Yi Shao, Angélica Liechti, et al. 2019. “Gene Expression Across Mammalian Organ Development.” Nature 571 (7766): 505–9

Examples

data(deg.table)
deg.table[1:2, ]

[Package spatialHeatmap version 1.99.1 Index]