slingCurves {slingshot} | R Documentation |
Extract the simultaneous principal curves from an object
containing slingshot
output.
slingCurves(x, ...) ## S4 method for signature 'PseudotimeOrdering' slingCurves(x, as.df = FALSE) ## S4 method for signature 'SingleCellExperiment' slingCurves(x, ...) ## S4 method for signature 'SlingshotDataSet' slingCurves(x, as.df = FALSE)
x |
an object containing |
... |
additional parameters to be passed to object-specific methods. |
as.df |
logical, whether to format the output as a |
A list of smooth lineage curves, each of which is a
principal_curve
object.
data("slingshotExample") rd <- slingshotExample$rd cl <- slingshotExample$cl pto <- slingshot(rd, cl, start.clus = '1') slingCurves(pto)