slingBranchGraph {slingshot} | R Documentation |
Builds a graph describing the relationships between the different branch assignments.
slingBranchGraph(x, ...) ## S4 method for signature 'ANY' slingBranchGraph(x, thresh = NULL, max_node_size = 100)
x |
an object containing |
... |
additional arguments passed to object-specific methods. |
thresh |
weight threshold for assigning cells to lineages. A cell's
weight on a certain lineage must be greater than this value (default =
|
max_node_size |
the |
an igraph
object representing the relationships between
lineages.
data("slingshotExample") rd <- slingshotExample$rd cl <- slingshotExample$cl pto <- slingshot(rd, cl) slingBranchGraph(pto)