difference_score {simplifyEnrichment} | R Documentation |
Difference score
difference_score(mat, cl)
mat |
The similarity matrix. |
cl |
Cluster labels. |
This function measures the different between the similarity values for the terms that belong to the same clusters and in different clusters. The difference score is the Kolmogorov-Smirnov statistic between the two distributions.
A numeric scalar.
mat = readRDS(system.file("extdata", "random_GO_BP_sim_mat.rds", package = "simplifyEnrichment")) cl = binary_cut(mat) difference_score(mat, cl)