twoCompsEst2 {sesame} | R Documentation |
Estimate the fraction of the 2nd component in a 2-component mixture
twoCompsEst2( pop1, pop2, target, use.ave = TRUE, diff_1m2u = NULL, diff_1u2m = NULL )
pop1 |
Reference methylation level matrix for population 1 |
pop2 |
Reference methylation level matrix for population 2 |
target |
Target methylation level matrix to be analyzed |
use.ave |
use population average in selecting differentially methylated probes |
diff_1m2u |
A vector of differentially methylated probes (methylated in population 1 but unmethylated in population 2) |
diff_1u2m |
A vector of differentially methylated probes (unmethylated in population 1 but methylated in population 2) |
Estimate of the 2nd component in the 2-component mixture