getProbesByRegion {sesame} | R Documentation |
The function takes a genomic coordinate and output the a vector of probes on the specified platform that falls in the given genomic region.
getProbesByRegion( chrm, beg = 1, end = -1, platform = c("EPIC", "HM450"), refversion = c("hg38", "hg19") )
chrm |
chromosome |
beg |
begin, 1 if omitted |
end |
end, chromosome end if omitted |
platform |
EPIC or HM450 |
refversion |
hg38 or hg19 |
probes that fall into the given region
getProbesByRegion('chr5', 135413937, 135419936, refversion = 'hg19', platform = 'HM450')