getSexInfo {sesame}R Documentation

Get sex-related information

Description

The function takes a SigDF and returns a vector of three numerics: the median intensity of chrY probes; the median intensity of chrX probes; and fraction of intermediate chrX probes. chrX and chrY probes excludes pseudo-autosomal probes.

Usage

getSexInfo(sdf)

Arguments

sdf

a SigDF

Value

medianY and medianX, fraction of XCI, methylated and unmethylated X probes, median intensities of auto-chromosomes.

Examples

sesameDataCache("EPIC") # if not done yet
sdf <- sesameDataGet('EPIC.1.SigDF')
getSexInfo(sdf)

[Package sesame version 1.12.5 Index]