reIdentify {sesame} | R Documentation |
This requries setting a seed with a secret number that was used to de-identify the IDAT (see example). This requires a secret number that was used to de-idenitfy the IDAT
reIdentify(path, out_path = NULL, snps = NULL, mft = NULL)
path |
input IDAT file |
out_path |
output IDAT file |
snps |
SNP definition, if not given, default to SNP probes |
mft |
sesame-compatible manifest if non-standard |
NULL, changes made to the IDAT files
temp_out <- tempfile("test") set.seed(123) reIdentify(system.file( "extdata", "4207113116_A_Grn.idat", package = "sesameData"), temp_out) unlink(temp_out)