medianTotalIntensity {sesame}R Documentation

Whole-dataset-wide Median Total Intensity (M+U)

Description

The function takes one single SigDF and computes median intensity of M+U for each probe. This function outputs a single numeric for the median.

Usage

medianTotalIntensity(sdf, mask = TRUE)

Arguments

sdf

a SigDF

mask

whether to mask probes using mask column

Value

median of all intensities

Examples

sesameDataCache("EPIC") # if not done yet
sdf <- sesameDataGet('EPIC.1.SigDF')
medianTotalIntensity(sdf)

[Package sesame version 1.12.0 Index]