getDatabaseSets {sesame} | R Documentation |
getDatabaseSets retrieves database sets from a meta data sheet by querying the group, platform, reference columns. The data is returned as a list where names correspond to chosen database sets.
getDatabaseSets( titles = NA, group = NA, platform = NA, reference = NA, verbose = TRUE )
titles |
vector containing the characters associated with the selected database sets; only non-NA locations will be returned. Optional. (Default: c("20210810_MM285_TFBS_ENCODE"). |
group |
string representing the group for which the database sets will be returned. Optional. (Default: NA). |
platform |
string representing the platform (EPIC, HM450, HM27, MM285) for which database sets will be returned. Optional. (Default: NA). |
reference |
string representing the reference (hg19, hg38, mm9, mm10) for which the database sets will be returned. Optional. (Default NA). |
verbose |
Logical value indicating whether intermediate outputs will be displayed to console. Optional. (Default: TRUE). |
One list of vectors corresponding to aggregated database sets.
databaseSetNames = c('KYCG.MM285.seqContextN.20210630', 'KYCG.MM285.designGroup.20210210') databaseSets = getDatabaseSets(databaseSetNames, verbose=FALSE)